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The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments, without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.


Lighting-fast processing speed
Ease of use
It offers support for sophisticated analytics
Real-time stream processing
It is flexible
Active and expanding community

Official website

Tutorial and documentation

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